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All functions

getFinalSize()
Calculate final size of outbreak: the total number of infections in each group
getFinalSizeDist()
Estimate the distribution of final outbreak sizes by group using stochastic simulations of multi-group model
getFinalSizeODE()
Calculate outbreak final size, the total number of infections in each group, by numerically solving the multi-group ordinary differential equation
getSizeAtTime()
Calculate outbreak size at a given time
run_my_app()
Runs the shiny app
transmissionRates()
Calculate transmission rate matrix for multi-group model with specified R0