Probability that one initial case leads to an outbreak lasting less than g generations of transmission.

Probability that one initial case leads to an outbreak lasting less than g generations of transmission.

Usage

pGenSwitch1(gMax, R0, k0, Rc, kc)

Arguments

gMax

Maximum number of generations

R0

Basic reproduction number: mean of negative binomial offspring distribution from generation one

k0

Dispersion of negative binomial offspring distribution from generation one

Rc

Control reproduction number: mean of negative binomial offspring distribution from generation two plus

kc

Dispersion of negative binomial offspring distribution from generation two plus

Value

A vector of probabilities for each number of generations from 1 to gmax

Author

Damon Toth

Examples

# Probability of outbreak lasting less than 1,2,3,...,10 generations:
pGenSwitch1(gMax=10, R0=3, k0=0.1, Rc=0.5, kc=1)
#>  [1] 0.7093553 0.8731166 0.9403431 0.9710355 0.9857245 0.9929128 0.9964689
#>  [8] 0.9982376 0.9991196 0.9995600