Log-Normal Acquisition Parameters

Acquisition parameters for the log-normal model (LogNormalAbxICP). This model has 8 acquisition parameters accessed by index in C++. Note: When accessed via setupLogNormalICPAcquisition, parameters are set by index, so this returns an unnamed list where position matters.

Usage

LogNormalAcquisitionParams(
  time = Param(0, 0),
  constant = Param(0.001, 1),
  log_tot_inpat = Param(-1, 0),
  log_col = Param(1, 0),
  col = Param(0, 0),
  abx_col = Param(0, 0),
  onabx = Param(0, 0),
  everabx = Param(0, 0)
)

Arguments

time

Time parameter (index 0) (\(\beta_t\))

constant

Constant parameter (index 1) (\(\beta_0\))

log_tot_inpat

Log total in-patients parameter (index 2)

log_col

Log number colonized parameter (index 3) (\(\beta_c\))

col

Number colonized parameter (index 4)

abx_col

Number of colonized individuals on antibiotics parameter (index 5) (\(\beta_{\bullet℞}\))

onabx

Susceptible patient currently on antibiotics effect (index 6) (\(\beta_{\circ℞}\))

everabx

Susceptible patient ever on antibiotics effect (index 7) (\(\beta_{\circ^*℞}\))

Value

An unnamed list of 8 parameters in the correct order for LogNormalAbxICP.

Examples

LogNormalAcquisitionParams()
#> [[1]]
#> $init
#> [1] 0
#> 
#> $update
#> [1] FALSE
#> 
#> $prior
#> [1] 0
#> 
#> $weight
#> [1] 0
#> 
#> attr(,"class")
#> [1] "Param"
#> 
#> [[2]]
#> $init
#> [1] 0.001
#> 
#> $update
#> [1] TRUE
#> 
#> $prior
#> [1] 0.001
#> 
#> $weight
#> [1] 1
#> 
#> attr(,"class")
#> [1] "Param"
#> 
#> [[3]]
#> $init
#> [1] -1
#> 
#> $update
#> [1] FALSE
#> 
#> $prior
#> [1] -1
#> 
#> $weight
#> [1] 0
#> 
#> attr(,"class")
#> [1] "Param"
#> 
#> [[4]]
#> $init
#> [1] 1
#> 
#> $update
#> [1] FALSE
#> 
#> $prior
#> [1] 1
#> 
#> $weight
#> [1] 0
#> 
#> attr(,"class")
#> [1] "Param"
#> 
#> [[5]]
#> $init
#> [1] 0
#> 
#> $update
#> [1] FALSE
#> 
#> $prior
#> [1] 0
#> 
#> $weight
#> [1] 0
#> 
#> attr(,"class")
#> [1] "Param"
#> 
#> [[6]]
#> $init
#> [1] 0
#> 
#> $update
#> [1] FALSE
#> 
#> $prior
#> [1] 0
#> 
#> $weight
#> [1] 0
#> 
#> attr(,"class")
#> [1] "Param"
#> 
#> [[7]]
#> $init
#> [1] 0
#> 
#> $update
#> [1] FALSE
#> 
#> $prior
#> [1] 0
#> 
#> $weight
#> [1] 0
#> 
#> attr(,"class")
#> [1] "Param"
#> 
#> [[8]]
#> $init
#> [1] 0
#> 
#> $update
#> [1] FALSE
#> 
#> $prior
#> [1] 0
#> 
#> $weight
#> [1] 0
#> 
#> attr(,"class")
#> [1] "Param"
#>