Create a new model object

Creates and initializes a model object based on the provided parameters. This allows direct creation and inspection of model objects without running MCMC. Returns a list with all model parameter values for verification.

Usage

newModelExport(modelParameters, verbose = FALSE)

Arguments

modelParameters

List of model parameters, including:

• modname Name of the model (e.g., "LogNormalModel", "LinearAbxModel", "LinearAbxModel2", "MixedModel")

• nstates Number of states in the model

• nmetro Number of metropolis steps

• forward Forward parameter

• cheat Cheat parameter

verbose

Print progress messages (default: false)

Value

A list containing the initialized model parameters:

• Insitu - In situ parameters

• SurveillanceTest - Surveillance test parameters

• ClinicalTest - Clinical test parameters

• OutCol - Out of unit colonization parameters

• InCol - In unit colonization parameters

• Abx - Antibiotic parameters